Martin Hanczyc: The line between life and not-life

148,420 views ・ 2011-11-07

TED


Please double-click on the English subtitles below to play the video.

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So historically there has
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been a huge divide between what people
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consider to be non-living systems on one
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side, and living systems on the other side.
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So we go from, say, this beautiful and
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complex crystal as non-life, and this rather
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beautiful and complex cat on the other side.
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Over the last hundred and fifty years or so,
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science has kind of blurred this distinction
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between non-living and living systems, and
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now we consider that there may be a kind
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of continuum that exists between the two.
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We'll just take one example here:
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a virus is a natural system, right?
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But it's very simple. It's very simplistic.
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It doesn't really satisfy all the requirements,
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it doesn't have all the characteristics
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of living systems and is in fact a parasite
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on other living systems in order to, say,
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reproduce and evolve.
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But what we're going to be talking about here
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tonight are experiments done on this sort of
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non-living end of this spectrum -- so actually
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doing chemical experiments in the laboratory,
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mixing together nonliving ingredients
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to make new structures, and that these
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new structures might have some of the
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characteristics of living systems.
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Really what I'm talking about here is
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trying to create a kind of artificial life.
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So what are these characteristics that I'm
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talking about? These are them.
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We consider first that life has a body.
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Now this is necessary to distinguish the self
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from the environment.
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Life also has a metabolism. Now this is a
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process by which life can convert resources
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from the environment into building blocks
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so it can maintain and build itself.
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Life also has a kind of inheritable information.
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Now we, as humans, we store our information
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as DNA in our genomes and we pass this
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information on to our offspring.
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If we couple the first two -- the body and the metabolism --
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we can come up with a system that could
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perhaps move and replicate, and if we
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coupled these now to inheritable information,
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we can come up with a system that would be
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more lifelike, and would perhaps evolve.
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And so these are the things we will try to do
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in the lab, make some experiments that have
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one or more of these characteristics of life.
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So how do we do this? Well, we use
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a model system that we term a protocell.
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You might think of this as kind of like a
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primitive cell. It is a simple chemical
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model of a living cell, and if you consider
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for example a cell in your body may have
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on the order of millions of different types
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of molecules that need to come together,
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play together in a complex network
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to produce something that we call alive.
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In the laboratory what we want to do
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is much the same, but with on the order of
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tens of different types of molecules --
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so a drastic reduction in complexity, but still
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trying to produce something that looks lifelike.
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And so what we do is, we start simple
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and we work our way up to living systems.
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Consider for a moment this quote by
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Leduc, a hundred years ago, considering a
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kind of synthetic biology:
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"The synthesis of life, should it ever occur,
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will not be the sensational discovery which we
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usually associate with the idea."
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That's his first statement. So if we actually
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create life in the laboratories, it's
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probably not going to impact our lives at all.
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"If we accept the theory of evolution, then
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the first dawn of synthesis of life must consist
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in the production of forms intermediate
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between the inorganic and the organic
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world, or between the non-living
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and living world, forms which possess
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only some of the rudimentary attributes of life"
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-- so, the ones I just discussed --
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"to which other attributes will be slowly added
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in the course of development by the
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evolutionary actions of the environment."
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So we start simple, we make some structures
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that may have some of these characteristics
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of life, and then we try to develop that
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to become more lifelike.
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This is how we can start to make a protocell.
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We use this idea called self-assembly.
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What that means is, I can mix some
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chemicals together in a test tube in my lab,
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and these chemicals will start to self-associate
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to form larger and larger structures.
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So say on the order of tens of thousands,
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hundreds of thousands of molecules will
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come together to form a large structure
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that didn't exist before.
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And in this particular example,
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what I took is some membrane molecules,
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mixed those together in the right environment,
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and within seconds it forms these rather
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complex and beautiful structures here.
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These membranes are also quite similar,
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morphologically and functionally,
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to the membranes in your body,
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and we can use these, as they say,
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to form the body of our protocell.
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Likewise,
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we can work with oil and water systems.
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As you know, when you put oil and water together,
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they don't mix, but through self-assembly
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we can get a nice oil droplet to form,
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and we can actually use this as a body for
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our artificial organism or for our protocell,
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as you will see later.
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So that's just forming some body stuff, right?
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Some architectures.
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What about the other aspects of living systems?
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So we came up with this protocell model here
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that I'm showing.
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We started with a natural occurring clay
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called montmorillonite.
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This is natural from the environment, this clay.
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It forms a surface that is, say, chemically active.
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It could run a metabolism on it.
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Certain kind of molecules like to associate
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with the clay. For example, in this case, RNA, shown in red
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-- this is a relative of DNA,
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it's an informational molecule --
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it can come along and it starts to associate
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with the surface of this clay.
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This structure, then, can organize the
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formation of a membrane boundary around
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itself, so it can make a body of
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liquid molecules around itself, and that's
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shown in green here on this micrograph.
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So just through self-assembly, mixing things
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together in the lab, we can come up with, say,
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a metabolic surface with some
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informational molecules attached
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inside of this membrane body, right?
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So we're on a road towards living systems.
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But if you saw this protocell, you would not
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confuse this with something that was actually alive.
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It's actually quite lifeless. Once it forms,
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it doesn't really do anything.
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So, something is missing.
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Some things are missing.
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So some things that are missing is,
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for example, if you had a flow of energy
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through a system, what we'd want
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is a protocell that can harvest
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some of that energy in order to maintain itself,
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much like living systems do.
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So we came up with a different protocell
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model, and this is actually simpler than the previous one.
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In this protocell model, it's just an oil droplet,
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but a chemical metabolism inside
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that allows this protocell to use energy
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to do something, to actually become dynamic,
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as we'll see here.
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You add the droplet to the system.
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It's a pool of water, and the protocell
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starts moving itself around in the system.
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Okay? Oil droplet forms
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through self-assembly, has a chemical
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metabolism inside so it can use energy,
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and it uses that energy to move itself
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around in its environment.
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As we heard earlier, movement is very
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important in these kinds of living systems.
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It is moving around, exploring its environment,
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and remodeling its environment, as you see,
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by these chemical waves that are forming by the protocell.
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So it's acting, in a sense, like a living system
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trying to preserve itself.
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We take this same moving protocell here,
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and we put it in another experiment,
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get it moving. Then I'm going
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to add some food to the system,
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and you'll see that in blue here, right?
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So I add some food source to the system.
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The protocell moves. It encounters the food.
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It reconfigures itself and actually then
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is able to climb to the highest concentration
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of food in that system and stop there.
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Alright? So not only do we have this system
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that has a body, it has a metabolism,
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it can use energy, it moves around.
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It can sense its local environment
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and actually find resources
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in the environment to sustain itself.
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Now, this doesn't have a brain, it doesn't have
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a neural system. This is just a sack of
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chemicals that is able to have this interesting
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and complex lifelike behavior.
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If we count the number of chemicals
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in that system, actually, including the water
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that's in the dish, we have five chemicals
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that can do this.
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So then we put these protocells together in a
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single experiment to see what they would do,
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and depending on the conditions, we have
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some protocells on the left that are
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moving around and it likes to touch the other
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structures in its environment.
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On the other hand we have two moving
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protocells that like to circle each other,
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and they form a kind of a dance, a complex dance with each other.
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Right? So not only do individual protocells
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have behavior, what we've interpreted as
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behavior in this system, but we also have
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basically population-level behavior
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similar to what organisms have.
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So now that you're all experts on protocells,
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we're going to play a game with these protocells.
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We're going to make two different kinds.
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Protocell A has a certain kind of chemistry
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inside that, when activated, the protocell
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starts to vibrate around, just dancing.
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So remember, these are primitive things,
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so dancing protocells, that's very
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interesting to us. (Laughter)
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The second protocell has a different
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chemistry inside, and when activated,
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the protocells all come together and they fuse
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into one big one. Right?
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And we just put these two together
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in the same system.
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So there's population A,
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there's population B, and then
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we activate the system,
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and protocell Bs, they're the blue ones,
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they all come together. They fuse together
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to form one big blob, and the other protocell
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just dances around. And this just happens
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until all of the energy in the system is
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basically used up, and then, game over.
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So then I repeated this experiment
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a bunch of times, and one time
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something very interesting happened.
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So, I added these protocells together
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to the system, and protocell A and protocell B
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fused together to form a hybrid protocell AB.
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That didn't happen before. There it goes.
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There's a protocell AB now in this system.
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Protocell AB likes to dance around for a bit,
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while protocell B does the fusing, okay?
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But then something even more interesting happens.
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Watch when these two large protocells,
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the hybrid ones, fuse together.
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Now we have a dancing protocell
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and a self-replication event. Right. (Laughter)
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Just with blobs of chemicals, again.
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So the way this works is, you have
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a simple system of five chemicals here,
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a simple system here. When they hybridize,
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you then form something that's different than
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before, it's more complex than before,
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and you get the emergence of another kind of
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lifelike behavior which
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in this case is replication.
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So since we can make some interesting
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protocells that we like, interesting colors and
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interesting behaviors, and they're very easy
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to make, and they have interesting lifelike
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properties, perhaps these protocells have
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something to tell us about the origin of life
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on the Earth. Perhaps these represent an
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easily accessible step, one of the first steps
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by which life got started on the early Earth.
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Certainly, there were molecules present on
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the early Earth, but they wouldn't have been
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these pure compounds that we worked with
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in the lab and I showed in these experiments.
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Rather, they'd be a real complex mixture of
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all kinds of stuff, because
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uncontrolled chemical reactions produce
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a diverse mixture of organic compounds.
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Think of it like a primordial ooze, okay?
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And it's a pool that's too difficult to fully
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characterize, even by modern methods, and
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the product looks brown, like this tar here
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on the left. A pure compound
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is shown on the right, for contrast.
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So this is similar to what happens when you
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take pure sugar crystals in your kitchen,
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you put them in a pan, and you apply energy.
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You turn up the heat, you start making
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or breaking chemical bonds in the sugar,
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forming a brownish caramel, right?
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If you let that go unregulated, you'll
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continue to make and break chemical bonds,
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forming an even more diverse mixture of
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molecules that then forms this kind of black
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tarry stuff in your pan, right, that's
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difficult to wash out. So that's what
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the origin of life would have looked like.
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You needed to get life out of this junk that
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is present on the early Earth,
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four, 4.5 billion years ago.
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So the challenge then is,
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throw away all your pure chemicals in the lab,
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and try to make some protocells with lifelike
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properties from this kind of primordial ooze.
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So we're able to then see the self-assembly
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of these oil droplet bodies again
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that we've seen previously,
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and the black spots inside of there
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represent this kind of black tar -- this diverse,
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very complex, organic black tar.
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And we put them into one of these
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experiments, as you've seen earlier, and then
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we watch lively movement that comes out.
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They look really good, very nice movement,
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and also they appear to have some kind of
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behavior where they kind of circle
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around each other and follow each other,
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similar to what we've seen before -- but again,
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working with just primordial conditions,
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no pure chemicals.
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These are also, these tar-fueled protocells,
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are also able to locate resources
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in their environment.
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I'm going to add some resource from the left,
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here, that defuses into the system,
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and you can see, they really like that.
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They become very energetic, and able
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to find the resource in the environment,
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similar to what we saw before.
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But again, these are done in these primordial
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conditions, really messy conditions,
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not sort of sterile laboratory conditions.
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These are very dirty little protocells,
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as a matter of fact. (Laughter)
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But they have lifelike properties, is the point.
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So, doing these artificial life experiments
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helps us define a potential path between
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non-living and living systems.
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And not only that, but it helps us
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broaden our view of what life is
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and what possible life there could be
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out there -- life that could be very different
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from life that we find here on Earth.
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And that leads me to the next
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term, which is "weird life."
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This is a term by Steve Benner.
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This is used in reference to a report
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in 2007 by the National Research Council
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in the United States, wherein
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they tried to understand how we can
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look for life elsewhere in the universe, okay,
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especially if that life is very different from life
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on Earth. If we went to another planet and
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we thought there might be life there,
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how could we even recognize it as life?
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Well, they came up with three very general
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criteria. First is -- and they're listed here.
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The first is, the system has to be in
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non-equilibrium. That means the system
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cannot be dead, in a matter of fact.
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Basically what that means is, you have
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an input of energy into the system that life
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can use and exploit to maintain itself.
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This is similar to having the Sun shining
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on the Earth, driving photosynthesis,
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driving the ecosystem.
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Without the Sun, there's likely to be
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no life on this planet.
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Secondly, life needs to be in liquid form,
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so that means even if we had some
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interesting structures, interesting molecules
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together but they were frozen solid,
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then this is not a good place for life.
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And thirdly, we need to be able to make
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and break chemical bonds. And again
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this is important because life transforms
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resources from the environment into
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building blocks so it can maintain itself.
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Now today, I told you about very strange
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and weird protocells -- some that contain clay,
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some that have primordial ooze in them,
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some that have basically oil
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instead of water inside of them.
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Most of these don't contain DNA,
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but yet they have lifelike properties.
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But these protocells satisfy
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these general requirements of living systems.
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So by making these chemical, artificial
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life experiments, we hope not only
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to understand something fundamental
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about the origin of life and the existence
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of life on this planet, but also
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what possible life there could be
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out there in the universe. Thank you.
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(Applause)
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