Paul Ewald: Can we domesticate germs?

25,460 views ・ 2008-05-12

TED


Please double-click on the English subtitles below to play the video.

00:18
What I'd like to do is just drag us all down into the gutter,
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and actually all the way down into the sewer
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because I want to talk about diarrhea.
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And in particular, I want to talk about
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the design of diarrhea.
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And when evolutionary biologists talk about design,
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they really mean design by natural selection.
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And that brings me to the title of the talk,
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"Using Evolution to Design Disease Organisms Intelligently."
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And I also have a little bit of a sort of smartass subtitle to this.
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But I'm not just doing this to be cute.
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I really think that this subtitle explains
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what somebody like me, who's sort of a Darwin wannabe,
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how they actually look at one's role in
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sort of coming into this field of health sciences and medicine.
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It's really not a very friendly field for evolutionary biologists.
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You actually see a great potential,
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but you see a lot of people who are sort of defending their turf,
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and may actually be very resistant, when one tries
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to introduce ideas.
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So, all of the talk today is going to deal with two general questions.
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One is that, why are some disease organisms more harmful?
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And a very closely related question, which is,
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how can we take control of this situation once we understand
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the answer to the first question?
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How can we make the harmful organisms more mild?
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And I'm going to be talking, to begin with, as I said,
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about diarrheal disease organisms.
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And the focus when I'm talking about the diarrheal organisms,
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as well as the focus when I'm talking about any organisms
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that cause acute infectious disease,
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is to think about the problem from a germ's point of view,
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germ's-eye view.
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And in particular, to think about a fundamental idea
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which I think makes sense out of a tremendous amount of variation
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in the harmfulness of disease organisms.
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And that idea is that from the germ's-eye point of view,
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disease organisms have to get from one host to another,
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and often they have to rely on the well-being of the host
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to move them to another host.
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But not always.
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Sometimes, you get disease organisms
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that don't rely on host mobility at all for transmission.
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And when you have that, then evolutionary theory tells us
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that natural selection will favor the more exploitative,
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more predator-like organisms.
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So, natural selection will favor organisms
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that are more likely to cause damage.
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If instead transmission to another host requires host mobility,
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then we expect that the winners of the competition
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will be the milder organisms.
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So, if the pathogen doesn't need the host to be healthy and active,
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and actual selection favors pathogens
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that take advantage of those hosts,
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the winners in the competition are those that exploit the hosts
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for their own reproductive success.
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But if the host needs to be mobile in order to transmit the pathogen,
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then it's the benign ones that tend to be the winners.
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So, I'm going to begin by applying this idea to diarrheal diseases.
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Diarrheal disease organisms get transmitted in basically three ways.
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They can be transmitted from person-to-person contact,
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person-to-food-then-to-person contact,
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when somebody eats contaminated food,
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or they can be transmitted through the water.
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And when they're transmitted through the water,
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unlike the first two modes of transmission,
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these pathogens don't rely on a healthy host for transmission.
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A person can be sick in bed and still infect tens, even hundreds
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of other individuals.
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To sort of illustrate that, this diagram emphasizes that
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if you've got a sick person in bed,
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somebody's going to be taking out the contaminated materials.
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They're going to wash those contaminated materials,
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and then the water may move into sources of drinking water.
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People will come in to those places where you've got
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contaminated drinking water,
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bring things back to the family,
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may drink right at that point.
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The whole point is that a person who can't move
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can still infect many other individuals.
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And so, the theory tells us that
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when diarrheal disease organisms are transported by water,
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we expect them to be more predator-like, more harmful.
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And you can test these ideas.
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So, one way you can test is just look at all diarrheal bacteria,
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and see whether or not the ones that tend to be
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more transmitted by water, tend to be more harmful.
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And the answer is -- yep, they are.
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Now I put those names in there just for the bacteria buffs,
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but the main point here is that --
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(Laughter)
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there's a lot of them here, I can tell --
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the main point here is that those data points
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all show a very strong, positive association between
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the degree to which a disease organism is transmitted by water,
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and how harmful they are,
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how much death they cause per untreated infection.
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So this suggests we're on the right track.
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But this, to me, suggests that we really need
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to ask some additional questions.
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Remember the second question that I raised at the outset was,
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how can we use this knowledge
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to make disease organisms evolve to be mild?
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Now, this suggests that if you could just block waterborne transmission,
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you could cause disease organisms to shift from
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the right-hand side of that graph to the left-hand side of the graph.
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But it doesn't tell you how long.
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I mean, if this would require thousands of years,
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then it's worthless in terms of controlling of these pathogens.
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But if it could occur in just a few years,
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then it might be a very important way to control
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some of the nasty problems that we haven't been able to control.
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In other words, this suggests that we could
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domesticate these organisms.
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We could make them evolve to be not so harmful to us.
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And so, as I was thinking about this, I focused on this organism,
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which is the El Tor biotype of the organism called Vibrio cholerae.
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And that is the species of organism that is responsible
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for causing cholera.
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And the reason I thought this is a really great organism to look at
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is that we understand why it's so harmful.
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It's harmful because it produces a toxin,
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and that toxin is released when the organism
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gets into our intestinal tract.
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It causes fluid to flow from the cells that line our intestine
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into the lumen, the internal chamber of our intestine,
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and then that fluid goes the only way it can, which is out the other end.
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And it flushes out thousands of different other competitors
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that would otherwise make life difficult for the Vibrios.
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So what happens, if you've got an organism,
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it produces a lot of toxin.
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After a few days of infection you end up having --
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the fecal material really isn't so disgusting as we might imagine.
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It's sort of cloudy water.
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And if you took a drop of that water,
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you might find a million diarrheal organisms.
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If the organism produced a lot of toxin,
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you might find 10 million, or 100 million.
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If it didn't produce a lot of this toxin,
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then you might find a smaller number.
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So the task is to try to figure out
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how to determine whether or not you could get an organism like this
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to evolve towards mildness by blocking waterborne transmission,
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thereby allowing the organism only to be transmitted
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by person-to-person contact,
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or person-food-person contact --
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both of which would really require that people be
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mobile and fairly healthy for transmission.
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Now, I can think of some possible experiments.
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One would be to take a lot of different strains of this organism --
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some that produce a lot of toxins, some that produce a little --
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and take those strains and spew them out in different countries.
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Some countries that might have clean water supplies,
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so that you can't get waterborne transmission:
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you expect the organism to evolve to mildness there.
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Other countries, in which you've got a lot of waterborne transmission,
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there you expect these organisms to evolve
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towards a high level of harmfulness, right?
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There's a little ethical problem in this experiment.
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I was hoping to hear a few gasps at least.
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That makes me worry a little bit.
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(Laughter)
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But anyhow, the laughter makes me feel a little bit better.
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And this ethical problem's a big problem.
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Just to emphasize this, this is what we're really talking about.
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Here's a girl who's almost dead.
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She got rehydration therapy, she perked up,
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within a few days she was looking like a completely different person.
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So, we don't want to run an experiment like that.
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But interestingly, just that thing happened in 1991.
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In 1991, this cholera organism got into Lima, Peru,
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and within two months it had spread to the neighboring areas.
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Now, I don't know how that happened,
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and I didn't have anything to do with it, I promise you.
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I don't think anybody knows,
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but I'm not averse to, once that's happened,
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to see whether or not the prediction that we would make,
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that I did make before, actually holds up.
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Did the organism evolve to mildness in a place like Chile,
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which has some of the most well protected water supplies
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in Latin America?
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And did it evolve to be more harmful in a place like Ecuador,
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which has some of the least well protected?
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And Peru's got something sort of in between.
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And so, with funding from the Bosack-Kruger Foundation,
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I got a lot of strains from these different countries
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and we measured their toxin production in the lab.
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And we found that in Chile -- within two months of the invasion of Peru
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you had strains entering Chile --
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and when you look at those strains,
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in the very far left-hand side of this graph,
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you see a lot of variation in the toxin production.
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Each dot corresponds to an islet from a different person --
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a lot of variation on which natural selection can act.
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But the interesting point is, if you look over the 1990s,
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within a few years the organisms evolved to be more mild.
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They evolved to produce less toxin.
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And to just give you a sense of how important this might be,
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if we look in 1995, we find that there's only one case of cholera,
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on average, reported from Chile every two years.
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So, it's controlled.
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That's how much we have in America,
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cholera that's acquired endemically,
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and we don't think we've got a problem here.
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They didn't -- they solved the problem in Chile.
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But, before we get too confident, we'd better look at some of those other countries,
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and make sure that this organism doesn't just always evolve toward mildness.
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Well, in Peru it didn't.
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And in Ecuador -- remember, this is the place where it has
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the highest potential waterborne transmission --
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it looked like it got more harmful.
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In every case there's a lot of variation,
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but something about the environment the people are living in,
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and I think the only realistic explanation is that it's
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the degree of waterborne transmission,
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favored the harmful strains in one place, and mild strains in another.
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So, this is very encouraging,
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it suggests that something that we might want to do anyhow,
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if we had enough money, could actually give us a much bigger bang for the buck.
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It would make these organisms evolve to mildness,
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so that even though people might be getting infected,
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they'd be infected with mild strains.
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It wouldn't be causing severe disease.
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But there's another really interesting aspect of this,
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and this is that if you could control the evolution of virulence,
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evolution of harmfulness,
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then you should be able to control antibiotic resistance.
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And the idea is very simple.
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If you've got a harmful organism,
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a high proportion of the people are going to be symptomatic,
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a high proportion of the people are going to be going to get antibiotics.
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You've got a lot of pressure favoring antibiotic resistance,
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so you get increased virulence leading to
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the evolution of increased antibiotic resistance.
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And once you get increased antibiotic resistance,
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the antibiotics aren't knocking out the harmful strains anymore.
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So, you've got a higher level of virulence.
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So, you get this vicious cycle.
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The goal is to turn this around.
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If you could cause an evolutionary decrease in virulence
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by cleaning up the water supply,
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you should be able to get an evolutionary decrease
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in antibiotic resistance.
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So, we can go to the same countries and look and see.
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Did Chile avoid the problem of antibiotic resistance,
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whereas did Ecuador actually have the beginnings of the problem?
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If we look in the beginning of the 1990s,
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we see, again, a lot of variation.
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In this case, on the Y-axis, we've just got a measure of antibiotic sensitivity --
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and I won't go into that.
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But we've got a lot of variation in antibiotic sensitivity in Chile,
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Peru and Ecuador, and no trend across the years.
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But if we look at the end of the 1990s, just half a decade later,
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we see that in Ecuador they started having a resistance problem.
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Antibiotic sensitivity was going down.
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And in Chile, you still had antibiotic sensitivity.
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So, it looks like Chile dodged two bullets.
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They got the organism to evolve to mildness,
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and they got no development of antibiotic resistance.
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Now, these ideas should apply across the board,
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as long as you can figure out why some organisms evolved to virulence.
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And I want to give you just one more example,
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because we've talked a little bit about malaria.
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And the example I want to deal with is,
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or the idea I want to deal with, the question is,
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what can we do to try to get the malarial organism to evolve to mildness?
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Now, malaria's transmitted by a mosquito,
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and normally if you're infected with malaria, and you're feeling sick,
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it makes it even easier for the mosquito to bite you.
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And you can show, just by looking at data from literature,
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that vector-borne diseases are more harmful
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than non-vector-borne diseases.
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But I think there's a really fascinating example
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of what one can do experimentally to try to actually demonstrate this.
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In the case of waterborne transmission,
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we'd like to clean up the water supplies,
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see whether or not we can get those organisms to evolve towards mildness.
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In the case of malaria, what we'd like to do is mosquito-proof houses.
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And the logic's a little more subtle here.
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If you mosquito-proof houses,
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when people get sick, they're sitting in bed --
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or in mosquito-proof hospitals, they're sitting in a hospital bed --
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and the mosquitoes can't get to them.
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So, if you're a harmful variant
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in a place where you've got mosquito-proof housing, then you're a loser.
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The only pathogens that get transmitted
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are the ones that are infecting people that feel healthy enough
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to walk outside and get mosquito bites.
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So, if you were to mosquito proof houses,
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you should be able to get these organisms to evolve to mildness.
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And there's a really wonderful experiment that was done
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that suggests that we really should go ahead and do this.
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And that experiment was done in Northern Alabama.
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Just to give you a little perspective on this,
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I've given you a star at the intellectual center of the United States,
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which is right there in Louisville, Kentucky.
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And this really cool experiment was done
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about 200 miles south of there, in Northern Alabama,
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by the Tennessee Valley Authority.
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They had dammed up the Tennessee River.
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They'd caused the water to back up,
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they needed electric, hydroelectric power.
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And when you get stagnant water, you get mosquitoes.
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They found in the late '30s -- 10 years after they'd made these dams --
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that the people in Northern Alabama were infected with malaria,
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about a third to half of them were infected with malaria.
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This shows you the positions of some of these dams.
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OK, so the Tennessee Valley Authority was in a little bit of a bind.
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There wasn't DDT, there wasn't chloroquines: what do they do?
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Well, they decided to mosquito proof every house in Northern Alabama.
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So they did. They divided Northern Alabama into 11 zones,
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and within three years, about 100 dollars per house,
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they mosquito proofed every house.
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And these are the data.
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Every row across here represents one of those 11 zones.
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And the asterisks represent the time at which
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the mosquito proofing was complete.
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And so what you can see is that
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just the mosquito-proofed housing, and nothing else,
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caused the eradication of malaria.
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And this was, incidentally, published in 1949,
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in the leading textbook of malaria, called "Boyd's Malariology."
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But almost no malaria experts even know it exists.
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This is important,
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because it tells us that if you have moderate biting densities,
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you can eradicate malaria by mosquito proofing houses.
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Now, I would suggest that you could do this in a lot of places.
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Like, you know, just as you get into the malaria zone,
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sub-Saharan Africa.
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But as you move to really intense biting rate areas, like Nigeria,
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you're certainly not going to eradicate.
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But that's when you should be favoring evolution towards mildness.
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So to me, it's an experiment that's waiting to happen,
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and if it confirms the prediction, then
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we should have a very powerful tool.
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In a way, much more powerful than the kind of tools we're looking at,
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because most of what's being done today is
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to rely on things like anti-malarial drugs.
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And we know that, although it's great to make those
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anti-malarial drugs available at really low cost and high frequency,
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we know that when you make them highly available
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you're going to get resistance to those drugs.
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And so it's a short-term solution.
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This is a long-term solution.
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What I'm suggesting here is that we could get evolution
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working in the direction we want it to go,
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rather than always having to battle evolution as a problem
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that stymies our efforts to control the pathogen,
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for example with anti-malarial drugs.
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So, this table I've given just to emphasize
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that I've only talked about two examples.
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But as I said earlier, this kind of logic applies across the board
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for infectious diseases, and it ought to.
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Because when we're dealing with infectious diseases, we're dealing with living systems.
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We're dealing with living systems;
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we're dealing with systems that evolve.
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And so if you do something with those systems,
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they're going to evolve one way or another.
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And all I'm saying is that we need to figure out how they'll evolve,
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so that -- we need to adjust our interventions
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to get the most bang for the intervention buck,
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so that we can get these organisms to evolve in the direction we want them to go.
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So, I don't really have time to talk about those things,
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but I did want to put them up there,
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just to give you a sense that there really are solutions
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to controlling the evolution of harmfulness
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of some of the nasty pathogens that we're confronted with.
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And this links up with a lot of the other ideas that have been talked about.
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So, for example, earlier today there was discussion of,
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how do you really lower sexual transmission of HIV?
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What this emphasizes is that we need to figure out how it will work.
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Will it maybe get lowered if we alter the economy of the area?
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It may get lowered if we intervene in ways that
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encourage people to stay more faithful to partners, and so on.
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But the key thing is to figure out how to lower it,
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because if we lower it, we'll get an evolutionary change in the virus.
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And the data really do support this:
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that you actually do get the virus evolving towards mildness.
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And that will just add to the effectiveness of our control efforts.
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So the other thing I really like about this,
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besides the fact that it brings a whole new dimension
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into the study of control of disease,
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is that often the kinds of interventions that you want,
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that it indicates should be done,
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are the kinds of interventions that people want anyhow.
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But people just haven't been able to justify the cost.
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So, this is the kind of thing I'm talking about.
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If we know that we're going to get extra bang for the buck from providing clean water,
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then I think that we can say,
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let's push the effort into that aspect of the control,
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so that we can actually solve the problem,
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even though, if you just look at the frequency of infection,
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you would suggest that you can't solve the problem well enough
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just by cleaning up water supply.
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Anyhow, I'll end that there, and thank you very much.
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(Applause)
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